Monday, 6 October 2014

Simple graphs in R

This link: http://www.harding.edu/fmccown/r/ has some nice examples.

written by this guy: http://frankmccown.blogspot.co.uk/

However, for R for Biochemists, I think we really need some biochemical examples.

Ideally some:

  • Kd and Vmax
  • Time courses of protein production
  • Perhaps a simple protein assay
  • Need some correlation with statistics
  • Need some mean, standard deviation. 
  • Need some T-tests (one sided, paired), ANOVA
  • Want to do the multiple graph thing - very useful for data exploration.
  • Some grouping algorithms maybe?
  • Talk about good quality graphs
  • Publication quality. 

Interesting piece about R here:
http://stackoverflow.com/questions/3750153/relationship-between-plotting-packages-in-r

gnuplot vs R
http://www.manning-sandbox.com/thread.jspa?threadID=35427
gnuplot is just for graphing!
R is so much more!
Perhaps too much?

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