Wednesday, 22 April 2015

Learning more about fitting non-linear lines...

Many of the graphs used in biochemistry are non-linear curves. These include the calculation of LD50 and IC50 as well as the majority of curves associated with enzyme kinetics.

For these reasons, I am trying to understand more about the nls() function in R.

A Google search has revealed the following links which I am reading through:

  • https://stat.ethz.ch/R-manual/R-patched/library/stats/html/nls.html
    • key documentation supplied with R. 
  • http://robinlovelace.net/2013/10/23/nls-demonstation.html
    • contains info about how to calculate a r^2 value. 
  • http://www.walkingrandomly.com/?p=5254
    • Shows an example of an irregular set of points and a nicely fitted line.
  • https://rmazing.wordpress.com/2012/07/05/a-better-nls/#comments
Hmm, this is all quite technical and maybe even a bit more complicated than I need but hey....

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