Analysing Jim's Data again....

So I have a new lot of cellular data with new HA data in there.

Steps:

1. Turn into a CSV file in Excel
2. Delete negative values from the Int column for each channel - about 7 values
3. Create a new Project in R... AnalysingCellDataAgain20141105
4. Open the script.. AllDensityPlots20141021.R
5. Import data into R
6. Import map of plate into R
7. Create subset of the data to make life quicker and easier
8. Create each individual sample in a separate data frame 
1. is this necessary?
2. currently I have to change numbers in each to make it work. this can't be correct. 
9. Right now, I have just done the first 6. 
10. Graphed a few plots. 
11. Playing with ggplot scatter plots - still not got the right ones. 

Going home now after an hour and a quarter.