https://microbit.org/lessons/
https://www.digikey.co.uk/en/maker/blogs/2018/how-to-use-one-micro-bit-to-control-another
https://make.techwillsaveus.com/microbit/activities/microbot-radio-control
https://projects.raspberrypi.org/en/projects/microbit-meteorologist/7
Block editor for MicroBit says it requires a .mkcd or a .hex file.
.mckd - MakeCode Programme.
https://makecode.com/language
Key file on Github would seem to be Typescript
But I can't find a way to go from Typescript to .mkcd
Turns out, all I need to do was search for MiniBit in the extensions...
Looking at Jet Brains.
Free educational licence: https://www.jetbrains.com/community/education/#students
Trying Webstorm.
Need to integrate into Github...
Resource here to do that: https://www.jetbrains.com/help/webstorm/github.html#register-account
Can I make this work well?
Webstorm then asks for a link to Github.
Fine.
Brings it down.
Make an edit.
Preview: https://www.jetbrains.com/help/webstorm/editing-html-files.html#ws_html_preview_output_built_in_browser
Then try to upload...
Needed to set up a token to integrate Webstorm and Github.
Yes, it works.
Very happy. Need to add more code and repeat the cycle of work.
I downloaded some files from our Panopto recording area using advice from here:
https://support.panopto.com/s/article/How-to-Download-Video-or-Audio-Streams-as-MP4s
This allows download of audio and video separately - I downloaded as MP4.
Camtasia couldn't generate any sound from the MP4 files.
This site told me to use Audacity to do this: https://support.techsmith.com/hc/en-us/community/posts/360071641332-Importing-MP3-audio-file-into-Camtasia-8-1
Audacity required the use of a library: https://manual.audacityteam.org/man/installing_ffmpeg_for_mac.html
This allowed export of a Wav file.
Camtasia can use the Wav file.
Took a while but all in all quite good.
Trying to control git in the command line. It's difficult to keep it all straight in my mind.
I think part of the mix up is the Vi editor.
Press Esc
Type :wq
For write quit.
Some information here:
https://stackoverflow.com/questions/33504984/adding-a-git-commit-message-using-vi-on-os-x
https://medium.com/@steveamaza/how-to-write-a-proper-git-commit-message-e028865e5791
https://chris.beams.io/posts/git-commit/
git commit -m"Fix typo in introduction to user guide"So I want to be sure that drawProteins will be updated with the adjusted function that creates a chain when one is missing.
I've opened up R-Studio.
It says RELEASE_3_11.
I think this is the correct release for the next Bioconductor release - cut off time tomorrow and release date?
Does it add a chain when one is missing?
This should be done by the feature_to_dataframe() function.
OK: so # Add 1 chain if missing
is missing.
But, # Add 1 chain if missing
is on (REMOTE: UPSTREAM) master.
Will this be used to update the package?
I think so but how do I know this?
Check Build - Looks good.
OK, so
Released version of drawProteins is 1.8.0 and is here: http://bioconductor.org/packages/release/bioc/html/drawProteins.html
Development version of drawProteins is 1.9.0 and is here:http://bioconductor.org/packages/3.12/bioc/html/drawProteins.html
To check, I can open another R-Studio Project and download development version:
if (!requireNamespace("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("drawProteins")This is quite annoying. I think I have version 1.9.0 downloaded. That's what the session info says but it is NOT adding the chain making plotting impossible.
So something is not quite correct.
But WHAT???
I'm in a confusion mess.
Session info says: drawProteins_1.9.0
BUT
drawProteins::extract_feat_acc(feat1[[1]])
gives an object with only one element and no chain.
Because the drawProteins::extract_feat_acc function doesn't have the if statement that adds the chain.
OK. What to do?
# Uniprot entry without chains:
# A0A024QZX5
This page is important as I learned about accessing remote branches: http://gitready.com/intermediate/2009/02/13/list-remote-branches.html
Also lots about git on Bioconductor:
Pulling and pushing changes: http://bioconductor.org/developers/how-to/git/
head -17 shapes.eps.xml
It is a UNIX command not an R one!
R> # Converting the image
R> library(grConvert)
R> convertPicture("nzflag-original.svg", "nzflag-cairo.svg")
R> # Reading it into R
R> library(grImport2)
R> nzflag <- readPicture("nzflag-cairo.svg")
So convertPicture() into cairo svg first and then readPicture()
Got to be worth trying...
